CACR Research Publications » cellcenter

A User’s Guide to the Encyclopedia of DNA Elements (ENCODE)

cacrweb — Wed, 01 Jun 2011 23:24:29 +0000

The ENCODE Project Consortium (Shirley Pepke)

PLoS Biol 9(4): e1001046.doi:10.1371/journal.pbio.1001046

High resolution mapping of Twist to DNA in Drosophila embryos: Efficient functional analysis and evolutionary conservation

cacrweb — Wed, 09 Mar 2011 23:44:27 +0000

Genome Res. Published in Advance March 7, 2011,doi:10.1101/gr.104018.10

Anil Ozdemir, Katherine I. Fisher-Aylor, Shirley Pepke, Manoj Samanta, Leslie Dunipace, Kenneth McCue, Lucy Zeng, Nobuo Ogawa, Barbara J. Wold, and Angelike Stathopoulos

(Link)

Computational morphodynamics of plants: integrating development over space and time

cacrweb — Thu, 20 Jan 2011 22:08:11 +0000

Nature Reviews Molecular Cell Biology,Published online: 02 March 2011 | doi:10.1038/nrm3079

Adrienne H. K. Roeder, Paul T. Tarr, Cory Tobin, Xiaolan Zhang, Vijay Chickarmane, Alexandre Cunha, and Elliot M. Meyerowitz.

(Link)

An efficient method for computing steady state solutions with Gillespie’s direct method

cacrweb — Thu, 11 Nov 2010 19:03:47 +0000

J. Chem. Phys. 133, 144108 (2010); doi:10.1063/1.3489354 (7 pages)

S. Mauch and M. Stalzer

(Abstract)

Cell Image Analysis as a Basis for Understanding Plant Growth

cacrweb — Wed, 04 Aug 2010 19:53:20 +0000

Bioimage Informatics 2010, September 17-19, 2010, Pittsburgh, Pennsylvania, USA.

Alexandre Cunha, Adrienne Roeder, Bruce Shapiro, Paul Tarr, Cory Tobin, Elliot Meyerowitz

Segmenting the Sepal and Shoot Apical Meristem of Arabidopsis Thaliana

cacrweb — Wed, 04 Aug 2010 19:52:18 +0000

32nd Annual International IEEE Engineering in Medicine and Biology Conference, August 31 – September 4, 2010, Buenos Aires, Argentina.

Alexandre Cunha, Adrienne H.K. Roeder, Elliot M. Meyerowitz

Parallel Denoising

cacrweb — Wed, 09 Jun 2010 20:12:29 +0000

In SIAM Conference on Imaging Science, Chicago, Illinois, April 12-14, 2010.

Alexandre Cunha, Jerome Darbon.

In vivo Bioimaging Analysis for Simulating Plant Growth Regulation

cacrweb — Wed, 09 Jun 2010 20:09:58 +0000

In SIAM Conference on Life Sciences. Pittsburgh, Pennsylvania, July 12-15, 2010

A. Cunha, A. Roeder, P. Tarr, C. Tobin, V. Chickarmane, E. Meyerowitz.

Using Geometric Markers to Predict the Cell Division Plane in Meristem Cells

cacrweb — Wed, 09 Jun 2010 20:07:20 +0000

Functional-Structural Plant Models Workshop, September 12-17, 2010, University of California at Davis.

Bruce Shapiro, Marcus Heisler, Cory Tobin, Alexandre Cunha, Andrew Davis, Eric Mjolsness, Elliot Meyerowitz

Variability in the Control of Cell Division Underlies Sepal Epidermal Patterning in Arabidopsis thaliana.

cacrweb — Wed, 09 Jun 2010 19:54:53 +0000

PLoS Biology 8(5), 2010, pages: e1000367.

Adrienne H. K. Roeder, Vijay Chickarmane, Alexandre Cunha, Boguslaw Obara, B. S. Manjunath, Elliot M. Meyerowitz

(Article)