all molecule models furnished by
Siddharth Dasgupta as from the
Materials and Process Simulation Center
the MoleculeGeom module was developed as an extension of Iris
Explorer's BallStick module. it takes as input a pyramid
data structure, as passed from modules such as readBPD which reads
a molecule model in Brookhaven Protein DataBase Molecule format.
different options include the ability to display elements as points ot spheres (of given radius and smoothness/complexity), or none all. in the same fashion, bonds may be displayed as lines, colored lines, lines with colored end tips, or cylinders/sticks. color is based on a very simple element color table, or on a color map as passed in as an input.
to download this module, visit the asci repository, maintained by santiago v lombeyda.
| molecule displayed using points only
|| molecule displayed using lines only
| molecule displayed using colored lines
|| molecule displayed using lines with colored tips
| molecule displayed using cylinders/sticks only
|| molecule displayed using sticks and spheres/balls
| molecule displayed using small spheres
|| molecule displayed using larger spheres